Thursday, February 27, 2020

Anthropogenic seed dispersal: rethinking the origins of plant domestication


In a new manuscript, Dr. Robert Spengler argues that all of the earliest traits of plant domestication are linked to a mutualistic relationship in which plants recruited humans for seed dispersal
MAX PLANCK INSTITUTE FOR THE SCIENCE OF HUMAN HISTORY
IMAGE
IMAGE: A PHOTO OF AN EAR FROM A WILD BARLEY PLANT, WITH THE RIPE SEEDS NATURALLY SHATTERING OFF DUE TO THE BRITTLE RACHIS OR STEM STRUCTURE AT THEIR BASE. IN THE... view more 
CREDIT: ROBERT SPENGLER
The plants we consume for food have changed drastically in the 10,000 years since humans began practicing agriculture, but hominids have been intensively interacting with the plants and animals around them since before the dawn of our species. As humans became aware of the ability to modify crops through selective breeding, the evolution of new traits in plants greatly increased. However, plants have been evolving in response to human selective pressures since long before people began consciously altering them through breeding.
In a new study published in Trends in Plant Science, Dr. Robert Spengler examines these evolutionary responses and theorizes that all of the earliest traits to evolve in the wild relatives of modern domesticated crops are linked to human seed dispersal and the evolutionary need for a plant to spread its offspring.
Domestication syndrome and the emergence of similar traits
Many of the earliest traits of domestication in plants are similar across different crop species, a phenomenon evolutionary biologists refer to as parallel evolution. For example, in all large-seeded grass crops - e.g. wheat, barley, rice, oats - the first trait of domestication is a toughening of the rachis (the individual stem that holds a cereal grain to the ear). Likewise, in all large-seeded legumes, such as peas, lentils, fava beans, and kidney beans, the earliest trait of domestication is a non-shattering pod.
Archaeobotanists studying early plant domestication agree that the evolution of tougher rachises in cereal crops was a result of humans using sickles to harvest grains. During a harvest, the specimens with the most brittle rachises lost their seeds, whereas the plants with tougher rachises benefited from having their seeds protected and saved for the following year. Humans then cleared away competitive plants (weeding), tilled soil, sowed seeds, and maintained the crops until the next harvest. We can assume that the same process occurred for legumes.
For nearly a century, scholars have been aware of the fact that this parallel evolution was the result of similar selective pressures from people in different centers of domestication around the world, leading to what many researchers call "domestication syndrome." In the simplest biological sense, Spengler suggests, humans provide better seed-dispersal services for food crops than those plants would have had in the wild, causing them to evolve traits that facilitated agriculture and improved their own chances of reproduction.
The Evolution of Seed-Dispersal Traits in Crops
Archaeobotanists have studied seed-dispersal traits in the wild relatives of cereal and legume crops, but few have discussed how the wild relatives of other crops dispersed their seeds. In this manuscript, Spengler steps away from the heavy focus on these few plants and looks at the wild seed-dispersal processes in other crops.
Spengler notes that before the last Ice Age, megafaunal mammals, including humans, were key for the evolution of larger fruits in the wild. While some plants have mechanical methods of seed dispersal, the most common way plants spread their seeds is by recruiting animals to do it for them. Bright red cherries, for example, have evolved to entice birds with red-green color vision. The birds consume the sugary fruit, then fly to a new area and deposit the seed from the cherry. Larger fruits, however, require larger animals to distribute them, meaning the progenitor plants for most of the fruits in our produce markets today evolved to be spread by large mammals. Paleontologists have previously noted the parallel evolution of larger fruits to entice larger animals in many unrelated plant families, a process that Spengler reveals to be mirrored in the evolution of crops cultivated by humans.
Spengler also theorizes that megafaunal mammals may have been key to the dispersal of seeds in the progenitors of small-seeded grains, such as quinoa, millets, and buckwheat. With smooth, hard-shelled seeds that grow at the top of the plant, no secondary defensive compounds or thorns, and a rapid rate of growth, the foliage of these plants are the perfect food for grazing animals. The small size of these wild seeds may have been an evolutionary adaptation that allowed them to pass successfully through the digestive systems of hooved mammals, which often only allow seeds smaller than 2mm to pass. Conceptualizing domestication as seed-dispersal based evolution, as Spengler proposes, explains why the first traits of domestication in all of the small-seeded annual crops were thinning of the seed coat, an increase in seed size, and breaking of dormancy - a reversal of the traits that allowed for seed dispersal by grazing mammals. The domestication process severed the mutualistic ties these plants had with their wild seed dispersers and made them dependent upon humans for dispersal.
Understanding Plant Domestication as Seed-Dispersal-Based Mutualism
During the Early and Mid-Holocene, plants in specific locations around the world started to evolve new traits in response to human cultivation practices. As human populations increased in size and became more concentrated, the selective pressures that people placed on these plants increased. In the wild, plants often evolve mutualistic relationships in response to heavy herbivory pressures. The same evolutionary responses, Spengler argues, can be seen in farmers' fields during the early steps towards domestication, with plants developing traits to better use humans as seed dispersers.
"Humans are the best seed dispersers that have ever existed, dispersing plant species all over the world," Spengler says. "We are currently removing all competitive plant species across the Amazon to spread soybean seeds - a plant that originally evolved traits for a mutualistic relationship with humans in East Asia. Likewise, most of the prairies of the American Midwest have been removed in order to grow maize, a crop that evolved to recruit humans in tropical southern Mexico. Humans are powerful seed dispersers and plants will readily evolve new traits to spread their seeds and colonize new areas more successfully."
Dr. Spengler is the director of the archaeobotanical laboratories at the Max Planck Institute for the Science of Human History in Jena, Germany. "It is important look at the domestication of plants from an evolutionary ecology perspective and seek to find parallels between the evolution of plants in the wild and during early cultivation," says Spengler. "By modeling domestication as an equivalent process to evolution in the wild and setting aside the idea of conscious human innovation, we can more effectively study the questions of why and how this process occurred."

Wednesday, February 26, 2020

Each Mediterranean island has its own genetic pattern


CAPTION

Researchers found a large proportion of North African ancestry in one of the studied individuals who lived in Sardinia during the second half of the 3rd millennium BC.

CREDIT

© David Caramelli
The Mediterranean Sea has been a major route for maritime migrations as well as frequent trade and invasions during prehistory, yet the genetic history of the Mediterranean islands is not well documented despite recent developments in the study of ancient DNA. An international team led by researchers from the University of Vienna, Harvard University and University of Florence, Italy, is filling in the gaps with the largest study to date of the genetic history of ancient populations of Sicily, Sardinia and the Balearic Islands, increasing the number of individuals with reported data from 5 to 66.
The results reveal a complex pattern of immigration from Africa, Asia and Europe which varied in direction and its timing for each of these islands. For Sicily the article reports on a new ancestry during the Middle Bronze Age that chronologically overlaps with the Greek Mycenaean trade network expansion.
Sardinians descend from Neolithic farmers
A very different story is unraveled in the case of Sardinia. Despite contacts and trade with other Mediterranean populations, ancient Sardinians retained a mostly local Neolithic ancestry profile until the end of the Bronze Age. However, during the second half of the 3rd millennium BC, one of the studied individuals from Sardinia has a large proportion of North African ancestry. Taken together with previous results of a contemporary central Iberian individual and a later 2nd mill. BC Bronze Age individual from Iberia, it clearly shows prehistoric maritime migrations across the Mediterranean Sea from North Africa to locations in southern Europe, affecting more than 1 percent of individuals reported in the ancient DNA literature from this region and time to date.
"Our results show that maritime migrations from North Africa started long before the era of the eastern Mediterranean seafaring civilizations and moreover were occurring in multiple parts of the Mediterranean", says Ron Pinhasi, a co-senior author of the Department of Evolutionary Anthropology, University of Vienna.
During the Iron Age expansion and establishment of Greek and Phoenician colonies in the West Mediterranean islands, the two Sardinian individuals analyzed from that period had little, if any, ancestry from the previous long-established populations. "Surprisingly, our results show that despite these population fluxes and mixtures, modern Sardinians retained between 56-62 percent of ancestry from the first Neolithic farmers that arrived in Europe around 8000 years ago", says David Caramelli a co-senior author, and Director of Department of Biology at the University of Florence.
Migration from the Iberian Peninsula documented
"One of the most striking findings is about the arrival of ancestry from the Steppe north of the Black and Caspian Seas in some of the Mediterranean islands. While the ultimate origin of this ancestry was Eastern Europe, in the Mediterranean islands it arrived at least in part from the west, namely from Iberia", says David Reich, a co-senior author at Harvard University, who is also an investigator of the Howard Hughes Medical Institute and at the Broad Institute of MIT and Harvard. "This was likely the case for the Balearic Islands, in which some early residents probably derived at least part of their ancestry from Iberia", says first author Daniel Fernandes, of the Department of Evolutionary Anthropology, University of Vienna.

Tuesday, February 25, 2020

Human Populations survived the Toba volcanic super-eruption 74,000 years ago



New archaeological work supports the hypothesis that human populations were present in India by 80,000 years ago and that they survived one of the largest volcanic eruptions in the last two million years
MAX PLANCK INSTITUTE FOR THE SCIENCE OF HUMAN HISTORY
IMAGE
IMAGE: STONE TOOLS FOUND AT THE DHABA SITE CORRESPONDING WITH THE TOBA VOLCANIC SUPER-ERUPTION LEVELS. PICTURED HERE ARE DIAGNOSTIC MIDDLE PALAEOLITHIC CORE TYPES.view more 
CREDIT: CHRIS CLARKSON
The Toba super-eruption was one of the largest volcanic events over the last two million years, about 5,000 times larger than Mount St. Helen's eruption in the 1980s. The eruption occurred 74,000 years ago on the island of Sumatra, Indonesia, and was argued to have ushered in a "volcanic winter" lasting six to ten years, leading to a 1,000 year-long cooling of the Earth's surface. Theories purported that the volcanic eruption would have led to major catastrophes, including the decimation of hominin populations and mammal populations in Asia, and the near extinction of our own species. The few surviving Homo sapiens in Africa were said to have survived by developing sophisticated social, symbolic and economic strategies that enabled them to eventually re-expand and populate Asia 60,000 years ago in a single, rapid wave along the Indian Ocean coastline.
Fieldwork in southern India conducted in 2007 by some of this study's authors challenged these theories, leading to major debates between archaeologists, geneticists and earth scientists about the timing of human dispersals Out of Africa and the impact of the Toba super-eruption on climate and environments. The current study continues the debate, providing evidence that Homo sapiens were present in Asia earlier than expected and that the Toba super-eruption wasn't as apocalyptic as believed.
The Toba volcanic super-eruption and human evolution
The current study reports on a unique 80,000 year-long stratigraphic record from the Dhaba site in northern India's Middle Son Valley. Stone tools uncovered at Dhaba in association with the timing of the Toba event provide strong evidence that Middle Palaeolithic tool-using populations were present in India prior to and after 74,000 years ago. Professor J.N. Pal, principal investigator from the University of Allahabad in India notes that "Although Toba ash was first identified in the Son Valley back in the 1980s, until now we did not have associated archaeological evidence, so the Dhaba site fills in a major chronological gap."
Professor Chris Clarkson of the University of Queensland, lead author of the study, adds, "Populations at Dhaba were using stone tools that were similar to the toolkits being used by Homo sapiens in Africa at the same time. The fact that these toolkits did not disappear at the time of the Toba super-eruption or change dramatically soon after indicates that human populations survived the so-called catastrophe and continued to create tools to modify their environments." This new archaeological evidence supports fossil evidence that humans migrated out of Africa and expanded across Eurasia before 60,000 years ago. It also supports genetic findings that humans interbred with archaic species of hominins, such as Neanderthals, before 60,000 years ago.
Toba, climate change and human resilience
Though the Toba super-eruption was a colossal event, few climatologists and earth scientists continue to support the original formulation of the "volcanic winter" scenario, suggesting that the Earth's cooling was more muted and that Toba may not have actually caused the subsequent glacial period. Recent archaeological evidence in Asia, including the findings unearthed in this study, does not support the theory that hominin populations went extinct on account of the Toba super-eruption.
Instead, archaeological evidence indicates that humans survived and coped with one of the largest volcanic events in human history, demonstrating that small bands of hunter-gatherers were adaptable in the face of environmental change. Nevertheless, the peoples who lived around Dhaba more than 74,000 years ago do not seem to have significantly contributed to the gene pool of contemporary peoples, suggesting that these hunter-gatherers likely faced a series of challenges to their long-term survival, including the dramatic environmental changes of the following millennia. In summarizing the wider implications of this study, Professor Michael Petraglia of the Max Planck Institute says, "The archaeological record demonstrates that although humans sometimes show a remarkable level of resilience to challenges, it is also clear that people did not necessarily always prosper over the long term."

Latest Archaeology News


 
Europe

Ancient DNA from Sardinia reveals 6,000 years of genetic history

Jonathan Kantrowitz at Archaeology News Report - 18 hours ago
Analysis of ancient DNA details the population history of Sardinia, providing new insight into its unique history and ancestral connections among the peoples of the Mediterranean UNIVERSITY OF CHICAGO SHARE PRINT E-MAIL [image: IMAGE] IMAGE: THE S'ORCU 'E TUERI NURAGHI, ONE OF MANY DISTINCTIVE SARDINIAN BRONZE AGE STONE TOWERS DATING TO THE MID- TO LATE 2ND MILLENNIUM BC, AT A SITE INCLUDING IN THE STUDY.... view more CREDIT: GRUPPO GROTTE OGLIASTRA A new study of the genetic history of Sardinia, a Mediterranean island off the western coast of Italy, tells how genetic ancestry o...more »
 
Americas

Modern technology reveals old secrets about the great, white Maya road

Jonathan Kantrowitz at Archaeology News Report - 18 hours ago
[image: IMAGE] IMAGE: BUILT AT THE TURN OF THE 7TH CENTURY, THE WHITE PLASTER-COATED ROAD THAT BEGAN 100 KILOMETERS TO THE EAST IN COBÁ ENDS AT YAXUNÁ'S ANCIENT DOWNTOWN, IN THE CENTER OF... view more CREDIT: PHOTO COURTESY TRACI ARDREN/UNIVERSITY OF MIAMI Did a powerful queen of Cobá, one of the greatest cities of the ancient Maya world, build the longest Maya road to invade a smaller, isolated neighbor and gain a foothold against the emerging Chichén Itzá empire? The question has long intrigued Traci Ardren, archaeologist and University of Miami professor of anthropology. Now, she a... more »

Prehistoric skeleton discovered in Southern Mexico

Jonathan Kantrowitz at Archaeology News Report - 2 weeks ago
Remains of woman provide important clues on settlement of the American continent University of Heidelberg [image: IMAGE] *IMAGE: *The skeleton was found in the Chan Hol underwater cave near the city of Tulúm on Mexico's Yucatán peninsula. view more Credit: Photo: Eugenio Acevez A prehistoric human skeleton found on the Yucatán Peninsula in southern Mexico is at least 10,000 years old and most likely dates from the end of the most recent ice age, the late Pleistocene. An international research team led by geoscientists from Heidelberg University studied the remains of the approximate... more »

Early North Americans much more diverse than previously believed

Jonathan Kantrowitz at Archaeology News Report - 3 weeks ago
Ancient skulls tell new story about our first settlersAn analysis of four ancient skulls found in Mexico suggests that the first humans to settle in North America were more biologically diverse than scientists had previously believed. The skulls were from individuals who lived 9,000 to 13,000 years ago, in the late Pleistocene and early Holocene eras. These findings complicate the story accepted until now, based on ancient skeletons analyzed from South America, which suggested the first settlers in the Americas were very similar, said Mark Hubbe, co-lead author of the study and prof... more »

New study debunks myth of Cahokia's Native American lost civilization

Jonathan Kantrowitz at Archaeology News Report - 3 weeks ago
Ancient poop levels point to repopulation of iconic pre-Columbian metropolis University of California - Berkeley A University of California, Berkeley, archaeologist has dug up ancient human feces, among other demographic clues, to challenge the narrative around the legendary demise of Cahokia, North America's most iconic pre-Columbian metropolis. In its heyday in the 1100s, Cahokia -- located in what is now southern Illinois -- was the center for Mississippian culture and home to tens of thousands of Native Americans who farmed, fished, traded and built giant ritual mounds. By the... more »
 
Jonathan Kantrowitz at Archaeology News Report - 3 weeks ago
Working with lead isotopes taken from tooth enamel of prehistoric animals, researchers at the University of Arkansas have developed a new method for assessing the geographic origins of ancient humans. John Samuelsen, doctoral candidate in anthropology and research assistant at the Arkansas Archeological Survey, analyzed linear patterning of lead isotopes on teeth from a 600- to 800-year-old skull and mandible cemetery at the Crenshaw site in southwest Arkansas. The new method allowed the researchers to compare the ancient human teeth to those of prehistoric animals, as well as rocks... more »
 
Neanderthal-Denisovan etc.

Earliest interbreeding event between ancient human populations discovered

Jonathan Kantrowitz at Archaeology News Report - 4 days ago
Neanderthal-Denisovan ancestors interbred with a distantly related hominin 700,000 years ago UNIVERSITY OF UTAH SHARE PRINT E-MAIL [image: IMAGE] IMAGE: AN EVOLUTIONARY TREE INCLUDING FOUR PROPOSED EPISODES OF GENE FLOW. THE PREVIOUSLY UNKNOWN EVENT 744,372 YEARS AGO (ORANGE) SUGGESTS INTERBREEDING OCCURRED BETWEEN SUPER-ARCHAICS AND NEANDERTHAL-DENISOVAN ANCESTORS IN EURASIA.... view more CREDIT: ADAPTED FROM ALAN ROGERS For three years, anthropologist Alan Rogers has attempted to solve an evolutionary puzzle. His research untangles millions of years of human evolution by an... more »
 

Discovery at 'flower burial' site could unravel mystery of Neanderthal death rites

Jonathan Kantrowitz at Archaeology News Report - 5 days ago
CAPTION The Neanderthal skull, flattened by thousands of years of sediment and rock fall, in situ in Shanidar Cave, Iraqi Kurdistan. CREDIT Graeme Barker The first articulated Neanderthal skeleton to come out of the ground for over 20 years has been unearthed at one of the most important sites of mid-20th century archaeology: Shanidar Cave, in the foothills of Iraqi Kurdistan. Researchers say the new find offers an unparalleled opportunity to investigate the "mortuary practices" of this lost species using the latest technologies. Shanidar Cave was excavated in the 1950s, when archa... more »

New study identifies Neanderthal ancestry in African populations and describes its origin

Jonathan Kantrowitz at Archaeology News Report - 3 weeks ago
Princeton researchers led by Joshua Akey discovered that all modern humans carry some Neanderthal ancestry in their DNA - including Africans, which was not previously known [image: IMAGE] *IMAGE: *A team of Princeton researchers led by Joshua Akey found that that African individuals have considerably more Neanderthal ancestry than previously thought, which was only observable through the development of... view more Credit: Matilda Luk, Princeton University Office of Communications When the first Neanderthal genome was sequenced, using DNA collected from ancient bones, it was accom... more »

 

Ancient engravings were likely produced with aesthetic intent and marked group identity.

Jonathan Kantrowitz at Archaeology News Report - 5 days ago
Symbolic behaviour - such as language, account keeping, music, art, and narrative - constitutes a milestone in human cognitive evolution. But how, where and when did these complex practices evolve? This question is very challenging to address; human cognitive processes do not fossilize, making it very difficult to study the mental life of our Stone Age ancestors. However, in a new study published in the *Proceedings of the National Academy of Sciences* journal PNAS, an interdisciplinary team of cognitive scientists and archaeologists from Denmark, South Africa and Australia takes u... more »

Dog domestication during ice age

Jonathan Kantrowitz at Archaeology News Report - 5 days ago
Analysis of Paleolithic-era teeth from a 28,500-year-old fossil site in the Czech Republic provides supporting evidence for two groups of canids - one dog-like and the other wolf-like - with differing diets, which is consistent with the early domestication of dogs. The study, published in the *Journal of Archaeological Science*, was co-directed by Peter Ungar, Distinguished Professor of anthropology at the University of Arkansas. The researchers performed dental microwear texture analysis on a sample of fossils from the Předmostí site, which contains both wolf-like and dog-like cani... more »
 
Israel

Canaanite temple at Lachish: gold artifacts, cultic figurines, and oldest known etching of Hebrew letter 'Samech'

Jonathan Kantrowitz at Archaeology News Report - 6 days ago
[image: IMAGE] IMAGE: A CANAANITE STORAGE JAR WITH AN INSCRIPTION BEARING THE LETTER "SAMEK. " view more CREDIT: T. ROGOVSKI "And the Lord delivered Lachish into the hand of Israel, which took it on the second day, and smote it with the edge of the sword, and all the souls therein..." -Joshua, 10:32 The Biblical Book of Joshua tells the story of the ancient Israelites' entry into the Promised Land after a 40-year sojourn in the desert. Now, a team of archaeologists led by Professor Yosef Garfinkel at the Hebrew University of Jerusalem's Institute of Archaeology and Profe... more »

Canaanite temple uncovered in Lachish, a city destroyed by Joshua

Jonathan Kantrowitz at Archaeology News Report - 1 week ago
Complete article A Canaanite temple and many artifacts have been uncovered in a city that, according to the Bible, was destroyed by the Israelites when they entered the Land of Israel after 40 years in the desert. The discovery shed light on the extensive ruins of a structure dating back to the 12th century BCE in Lachish, the Hebrew University of Jerusalem announced Monday. “Joshua proceeded with all Israel to Lachish; he encamped against it and attacked it. God delivered Lachish into the hands of Israel. They captured it on the second day and put it and all the people in it to... more »

Monumental ninth-century b.c.e Omride ‘Royal Estate’ Found in Northern Israel

Jonathan Kantrowitz at Archaeology News Report - 1 week ago
Archaeologists have discovered a monumental pillared building at Horvat Tevet, an ancient site in the Jezreel Valley just outside the city of Afula. They believe the complex served as an estate for Israelite officials to collect and redistribute agricultural products in the surrounding region. The ruins at Horvat Tevet were uncovered as part of an ongoing salvage excavation. Due to the planned construction of a new route for Israel’s Highway 65, archaeologists from the Israel Antiquities Authority and Tel Aviv University have been hurriedly excavating the site for the past two years... more »
Jonathan Kantrowitz at Archaeology News Report - 2 weeks ago
Complete report In 2012, a monumental Iron Age-temple complex dating to late 10th-early 9th century BCE was discovered at Tel Moẓa near Jerusalem by archeologists of the Israel Antiquities Authority. The site, identified as the biblical city of Motẓa – within the boundary of the tribe of Benjamin (Joshua 18: 26) – served as an administrative center for the storage and redistribution of grain. Aerial photo of the temple at the end of the 2013 excavation. (Credit: SkyView, Israel Antiquities Authority) Horse Figurines. (Credit: Clara Amit, Israel Antiquities Authority)The dig is the... more »
Jonathan Kantrowitz at Archaeology News Report - 3 weeks ago
The Israel Antiquities Authority’s Theft Prevention Unit (“The Unit”) had there eyes on a resident of Kfar Kana for some time. Twice he had been caught red-handed using a metal detector without a permit and digging at antiquities sites without authorization. On both these occasions the perpetrator was tried in court, convicted, and sentenced to a fee. Nonetheless, the robber was undeterred. In collaboration with the Kfar Kana Police department, The Unit arrested the suspect for questioning, and searched his house. As a result, they recovered a cache of 232 ancient coins. The Unit’... more »
 
Asia

5200-year-old grains in the eastern Altai Mountains redate trans-Eurasian crop exchange

Jonathan Kantrowitz at Archaeology News Report - 1 week ago
Agricultural crops dispersed across Eurasia more than five millennia ago, causing significant cultural change in human populations across the ancient world. New discoveries in the Altai Mountains illustrate that this process occurred earlier than believed MAX PLANCK INSTITUTE FOR THE SCIENCE OF HUMAN HISTORY[image: IMAGE] IMAGE: DR. XINYING ZHOU AND HIS TEAM FROM THE IVPP IN BEIJING EXCAVATED THE TANGTIAN CAVE SITE DURING THE SUMMER OF 2016. view more CREDIT: XINYING ZHOU Most people are familiar with the historical Silk Road, but fewer people realize that the exchange of items, idea... more »
 
 
Australia/Oceania

Arnhem Land, Australia: arliest evidence of Homo sapiens use of plant foods outside Africa and the Middle East.

Jonathan Kantrowitz at Archaeology News Report - 5 days ago
Australia's first plant foods -- eaten by early populations 65,000 years ago -- have been discovered in Arnhem Land. Preserved as pieces of charcoal, the morsels were recovered from the debris of ancient cooking hearths at the Madjedbebe archaeological site, on Mirarr country in northern Australia. University of Queensland archaeobotanist Anna Florin said a team of archaeologists and Traditional Owners identified 10 plant foods, including several types of fruits and nuts, underground storage organs ('roots and tubers'), and palm stem. "By working with Elders and co-authors May Nango ... more »

Oral traditions and volcanic eruptions in Australia

Jonathan Kantrowitz at Archaeology News Report - 1 week ago
[image: IMAGE] IMAGE: LAKE SURPRISE, BUDJ BIM VOLCANIC COMPLEX, VICTORIA, AUSTRALIA. view more CREDIT: PHOTO VIA CREATIVE COMMONS. In Australia, the onset of human occupation (about 65,000 years?) and dispersion across the continent are the subjects of intense debate and are critical to understanding global human migration routes. A lack of ceramic artifacts and permanent structures has resulted in a scarcity of dateable archaeological sites older than about 10,000 years. Existing age constraints are derived largely from radiocarbon dating of charcoal and/or optically stimulate... more »

Wasp nests used to date ancient Kimberley rock art

Jonathan Kantrowitz at Archaeology News Report - 2 weeks ago
12,000-year-old Aboriginal rock art from the Kimberley region, Western Australia, University of Melbourne [image: IMAGE] *IMAGE: *Wasp nests help prove Aboriginal rock art is twice as old as the Giza Pyramids. view more Credit: Damien Finch Mud wasp nests have helped establish a date for one of the ancient styles of Aboriginal rock art in the Kimberley. University of Melbourne and ANSTO scientists put the Gwion Gwion art period around 12,000 years old. "This is the first time we have been able to confidently say Gwion style paintings were created around 12,000 years ago," said PhD st... more »

Easter Island society did not collapse prior to European

Jonathan Kantrowitz at Archaeology News Report - 2 weeks ago
Easter Island society did not collapse prior to European contact and its people continued to build its iconic moai statues for much longer than previously believed, according to a team of researchers including faculty at Binghamton University, State University of New York. The island of Rapa Nui is well-known for its elaborate ritual architecture, particularly its numerous statues (moai) and the monumental platforms that supported them (ahu). A widely-held narrative posits that construction of these monuments ceased sometime around 1600, following a major societal collapse. "Our r... more »

Monday, February 24, 2020

Ancient DNA from Sardinia reveals 6,000 years of genetic history


Analysis of ancient DNA details the population history of Sardinia, providing new insight into its unique history and ancestral connections among the peoples of the Mediterranean
UNIVERSITY OF CHICAGO
IMAGE
IMAGE: THE S'ORCU 'E TUERI NURAGHI, ONE OF MANY DISTINCTIVE SARDINIAN BRONZE AGE STONE TOWERS DATING TO THE MID- TO LATE 2ND MILLENNIUM BC, AT A SITE INCLUDING IN THE STUDY.... view more 
CREDIT: GRUPPO GROTTE OGLIASTRA
A new study of the genetic history of Sardinia, a Mediterranean island off the western coast of Italy, tells how genetic ancestry on the island was relatively stable through the end of the Bronze Age, even as mainland Europe saw new ancestries arrive. The study further details how the island's genetic ancestry became more diverse and interconnected with the Mediterranean starting in the Iron Age, as Phoenician, Punic, and eventually Roman peoples began arriving to the island.
The research, published in Nature Communications, analyzed genome-wide DNA data for 70 individuals from more than 20 Sardinian archaeological sites spanning roughly 6,000 years from the Middle Neolithic through the Medieval period. No previous study has used genome-wide DNA extracted from ancient remains to look at the population history of Sardinia.
"Geneticists have been studying the people of Sardinia for a long time, but we haven't known much about their past," said the senior author John Novembre, PhD, a leading computational biologist at the Univeristy of Chicago who studies genetic diversity in natural populations. "There have been clues that Sardinia has a particularly interesting genetic history, and understanding this history could also have relevance to larger questions about the peopling of the Mediterranean."
An interdisciplinary team
The people of Sardinia have long been studied by geneticists to understand human health. The island has one of the highest rates of people who live to 100 years or more, and its people have higher than average rates of autoimmune diseases and disorders such as beta-thalassemia and G6PD deficiency. Many villages in Sardinia also have high levels of relatedness, which makes uncovering the genetics of traits simpler. Across the island, the frequencies of genetic variants often differ from mainland Europe. These factors have made Sardinia a useful place for geneticists like senior author Francesco Cucca from the Università di Sassari in Italy to uncover genetic variants that may be linked to disease and aging.
"Contemporary Sardinians represent a reservoir for some variants that are currently very rare in continental Europe," Cucca said. "These genetic variants are tools we can use to dissect the function of genes and the mechanisms that are at the basis of genetic diseases."
Sardinia also has a unique archaeological, linguistic, and cultural heritage, and has been part of Mediterranean trade networks since the Neolithic age. How much the population's genetic ancestry has changed through these times, however, has been unknown.
To generate a new perspective on the genetic history of Sardinia, long-term collaborators Cucca and Novembre brought together an interdisciplinary group with geneticists, archaeologists, and ancient DNA experts. A team led by Johannes Krause at the Max Planck Institute for the Science of Human History and the University of Tübingen in Germany helped coordinate the sampling and carried out DNA sequencing and authentication. Teams led by Novembre and Cucca then analyzed the data and shared the results with the whole group for an interdisciplinary interpretation.
"We were thrilled to be able to generate such a dataset spanning six thousand years because the retrieval of ancient DNA from skeletal remains from Sardinia is very challenging," said Cosimo Posth, an archaeogeneticist at the Max Planck Institute and co-first author of the study.
Periods of stability and change
Sampling DNA from ancient remains allows scientists to get a snapshot of people living at a specific time and place, instead of using modern DNA and inferring the past based on assumptions and mathematical models. When the team compared the DNA of 70 ancient individuals collected from Sardinia to the DNA of other ancient and modern individuals, they uncovered two major patterns.
First, they saw that Sardinian individuals in the Middle Neolithic period (4100-3500 BCE) were closely related to people from mainland Europe of the time. Genetic ancestry then remained relatively stable on the island through at least the end of the "Nuragic" period (~900 BCE). This pattern differs from other regions of mainland Europe which experienced new ancestries entering from people moving across the continent in the Bronze Age.
The results also show the development of Sardinia's distinctive nuraghe stone towers and culture (after which the Nuragic period is named) did not coincide with any detectable, new genetic ancestry arriving to the island.
"We found striking stability in ancestry from the Middle Neolithic through the end of the Nuragic period in Sardinia," said Joe Marcus, a PhD student in the Department of Human Genetics at UChicago and a co-first author on the paper.
Second, the team found evidence of the arrival of different populations across the Mediterranean, first with Phoenicians originating from the Levant (modern-day Lebanon) and Punics, whose culture centered in Carthage (modern-day Tunisia). Then, new ancestry continued to appear during the Roman period and further in the Medieval period, as Sardinia became historically influenced by migration of people from modern-day Italy and Spain.
"We observed clear signals of dynamic periods of contact linking the island to the rest of the Mediterranean, appearing first in individuals from two Phoenician and Punic sites as early as 500 BCE, and then in individuals from the Roman and Medieval periods," said Harald Ringbauer, PhD, a postdoctoral researcher involved in the computational data analysis at UChicago and a co-first author on the paper.
The group's results help explain similarities with DNA from mainland European individuals of the Neolithic and Copper Age, such as "Ötzi the Iceman," an almost perfectly preserved, 5,300-year-old human discovered in alpine ice in northern Italy in 1991. Specifically, among modern Europeans, Ötzi's DNA is most similar to modern-day Sardinians. The new study supports the theory that this similarity remains because Sardinia had less turnover of genetic ancestry over time than mainland Europe, which experienced large-scale migrations in the Bronze Age.
Insights from the past, implications for the present
Besides providing new insight into mysteries of the past, studying ancient DNA also has implications for the well-being of present-day humans. This model of Sardinia's population history--establishment followed by relative isolation and then the arrival of new sources of diversity--provides a new framework for understanding how genetic variants with health implications became more frequent on the island.
"For future studies, we want to look more precisely at mutations that we think are involved in disease to see in which period they changed in frequency and how quickly they changed," Novembre said. "That will help us understand the processes acting on these diseases, and in turn gain a richer view that may yield insights for human health."

Modern technology reveals old secrets about the great, white Maya road

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Did a powerful queen of Cobá, one of the greatest cities of the ancient Maya world, build the longest Maya road to invade a smaller, isolated neighbor and gain a foothold against the emerging Chichén Itzá empire?
The question has long intrigued Traci Ardren, archaeologist and University of Miami professor of anthropology. Now, she and fellow scholars may be a step closer to an answer, after conducting the first lidar study of the 100-kilometer stone highway that connected the ancient cities of Cobá and Yaxuná on the Yucatan Peninsula 13 centuries ago.
Once used mainly by meteorologists to study clouds, lidar--short for "light detection and ranging"--technology is revolutionizing archaeology by enabling archaeologists to detect, measure, and map structures hidden beneath dense vegetation that, in some cases, has grown for centuries, engulfing entire cities. Often deployed from low-flying aircraft, lidar instruments fire rapid pulses of laser light at a surface, and then measure the amount of time it takes for each pulse to bounce back. The differences in the times and wavelengths of the bounce are then used to create digital 3D maps of hidden surface structures.
The lidar study, which Ardren and fellow researchers with the Proyecto de Interaccion del Centro de Yucatan (PIPCY) conducted in 2014 and 2017 of Sacbe 1--or White Road 1, as the white plaster-coated thoroughfare was called--may shed light on the intentions of Lady K'awiil Ajaw, the warrior queen who Ardren believes commissioned its construction at the turn of the 7th century.
In an analysis of the lidar study, recently published in the Journal of Archaeological Science, the researchers identified more than 8,000 tree-shrouded structures of varying sizes along the sacbe--with enough total volume to fill approximately 2,900 Olympic swimming pools. The study also confirmed that the road, which measures about 26 feet across, is not a straight line, as has been assumed since Carnegie Institute of Washington archaeologists mapped its entire length in the 1930s, with little more than a measuring tape and a compass.
Rather, the elevated road veered to incorporate preexisting towns and cities between Cobá, which known for its carved monuments depicting bellicose rulers standing over bound captives, controlled the eastern Yucatan, and Yaxuná--a smaller, older, city in the middle of the peninsula. Yet, the isolated Yaxuná (pronounced Ya-shoo-na) still managed to build a pyramid nearly three times bigger and centuries before Chichén Itzá's more famous Castillo, about 15 miles away.
"The lidar really allowed us to understand the road in much greater detail. It helped us identify many new towns and cities along the road--new to us, but preexisting the road," Ardren said. "We also now know the road is not straight, which suggests that it was built to incorporate these preexisting settlements, and that has interesting geo-political implications. This road was not just connecting Cobá and Yaxuná; it connected thousands of people who lived in the intermediary region."
It was partly Yaxuná's proximity to Chichén Itzá, Mexico's most famous Maya ruin which flourished after Yaxuná and Cobá waned, that led Ardren and other PIPCY researchers to theorize that K'awiil Ajaw built the road to invade Yaxuná and gain a foothold in the middle of the peninsula. Coba's ruler for several decades beginning in 640 A.D., she is depicted in stone carvings trampling over her bound captives.
"I personally think the rise of Chichén Itzá and its allies motivated the road," Ardren said. "It was built just before 700, at the end of the Classic Period, when Cobá is making a big push to expand. It's trying to hold on to its power, so with the rise of Chichén Itzá, it needed a stronghold in the center of the peninsula. The road is one of the last-gasp efforts of Cobá to maintain its power. And we believe it may have been one of the accomplishments of K'awiil Ajaw, who is documented as having conducted wars of territorial expansion."
To test their theory, Ardren, an expert on gender in ancient Maya society who edited the 2002 book "Ancient Maya Women," and fellow PIPCY scholars received funding from the National Science Foundation to excavate ancient household clusters along the great white road. Their goal is to determine the degree of similarities between the household goods in Cobá and Yaxuná before and after the road was built. The thinking, Ardren said, is that after the road linked the two cities, the goods found in Yaxuná would show increasing similarities to Cobá's.
So far, the researchers have excavated household clusters on the edge of both Cobá and Yaxuná, and they plan to begin a third dig this summer, at a spot informed by the lidar study. It sits between the two ancient Maya cities, on the great, white road that Ardren says would have glowed brightly even in the dark of night.
As she noted, the road was as much an engineering marvel as the monumental pyramids the Maya erected across southern Mexico, Guatemala, northern Belize and western Honduras. Although built over undulating terrain, the road was flat, with the uneven ground filled in with huge limestone boulders, and the surface coated with bright, white plaster. Essentially the same formula the Romans used for concrete in the third century B.C., the plaster was made by burning limestone and adding lime and water to the mixture.
"It would have been a beacon through the dense green of cornfields and fruit trees," Ardren said. "All the jungle we see today wasn't there in the past because the Maya cleared these areas. They needed wood to build their homes. And now that we know the area was densely occupied, we know they needed a lot of wood. Because they also needed it to burn limestone''--and build the longest road in the Maya world 13 centuries ago.