Tuesday, November 29, 2022

Study using DNA analysis of sacrificial spider monkey suggests Mesoamerican diplomacy

 

Peer-Reviewed Publication

 A multimethod archaeological study of a spider monkey sacrificed at Teotihuacàn, located approximately 25 miles from Mexico City, provides the earliest evidence of primate captivity and translocation in the Americas over 1,500 years ago.

Researchers at the University of Oklahoma’s Laboratories of Molecular Anthropology and Microbiome Research led the genetic analysis of the spider monkey’s skeleton. The OU team includes study co-authors Courtney Hofman, Ph.D., President’s Associates Presidential Professor in the Department of Anthropology, Dodge Family College of Arts and Sciences, with graduate student Robin Singleton and laboratory technician Karissa Hughes.

“Geoffrey’s spider monkeys are not found near Teotihuacàn today,” Hofman said. “Ancient DNA analysis of this spider monkey sought to identify the subspecies of the spider monkey, which can provide insight into ancient trade networks.”

“We were able to confirm that the spider monkey was most closely related to two endangered populations, the Mexican and the Yucatan spider monkey subspecies,” she added. “Using additional lines of evidence, including isotopic analysis, we hypothesized that this animal was of the Mexican subspecies, which today lives in parts of Mexico, Guatemala and Honduras. The presence of this animal in the central Mexican city of Teotihuacàn suggests that there was greater interaction with the Maya than previously understood and perhaps this spider monkey was a diplomatic gift.” 

The study, Earliest evidence of primate captivity and translocation supports gift diplomacy between Teotihuacan and the Maya, was published Nov. 21 in the journal Proceedings of the National Academy of Sciences and was featured in Science.

Nawa Sugiyama, assistant professor of anthropology at the University of California, Riverside, is the first author. In addition to the OU team, co-authors include researchers from Arizona State University; the Archéologie des Amériques in Paris, France; the Smithsonian Museum Conservation Institute; the RIKEN Institute in Kobe, Japan; and Washington State University.

Monday, November 28, 2022

Ancient Roman coins reveal long-lost emperor


A gold coin long dismissed as a forgery appears to be authentic and depicts a long-lost Roman emperor named Sponsian, according to a new study led by a University College London (UCL) researcher

Peer-Reviewed Publication

UNIVERSITY COLLEGE LONDON


Sponsian coin 

IMAGE: SPONSIAN GOLD COIN, C.260-C.270 CE (OBVERSE) view more 

CREDIT: THE HUNTERIAN, UNIVERSITY OF GLASGOW.

A gold coin long dismissed as a forgery appears to be authentic and depicts a long-lost Roman emperor named Sponsian, according to a new UCL-led study.

The coin, housed at The Hunterian collection at the University of Glasgow, was among a handful of coins of the same design unearthed in Transylvania, in present-day Romania, in 1713. They have been regarded as fakes since the mid-19th-century, due to their crude, strange design features and jumbled inscriptions.

In the new study, published in PLOS ONE, researchers compared the Sponsion coin with other Roman coins kept at The Hunterian, including two that are known to be genuine.

They found minerals on the coin’s surface that were consistent with it being buried in soil over a long period of time, and then exposed to air. These minerals were cemented in place by silica – cementing that would naturally occur over a long time in soil. The team also found a pattern of wear and tear that suggested the coin had been in active circulation.

Lead author Professor Paul N. Pearson (UCL Earth Sciences) said: “Scientific analysis of these ultra-rare coins rescues the emperor Sponsian from obscurity. Our evidence suggests he ruled Roman Dacia, an isolated gold mining outpost, at a time when the empire was beset by civil wars and the borderlands were overrun by plundering invaders.”

The Roman province of Dacia, a territory overlapping with modern-day Romania, was a region prized for its gold mines. Archaeological studies have established that the area was cut off from the rest of the Roman empire in around 260 CE. Surrounded by enemies, Sponsian may have been a local army officer forced to assume supreme command during a period of chaos and civil war, protecting the military and civilian population of Dacia until order was restored, and the province evacuated between 271 and 275 CE.

Coinage has always been an important symbol of power and authority. Recognising this and unable to receive official issues from the mint in Rome, Sponsian seems to have authorised the creation of locally produced coins, some featuring an image of his face, to support a functioning economy in his isolated frontier territory.

When the coins were discovered in the early 18th century, they were thought to be genuine and classed alongside other imitations of Roman coins made beyond the fringes of the empire. However, from the mid-19th century, attitudes changed. Coins from the hoard were dismissed as fakes because of the way they looked. This has been the accepted view until now.

The new study is the first time scientific analysis has been undertaken on any of the Sponsian coins. The research team used powerful microscopes in visible and ultraviolet light, as well as scanning electron microscopy and spectroscopy – studying how light at different wavelengths is absorbed or reflected – to study the coins’ surface.

Only four coins featuring Sponsian are known to have survived to the present day, all apparently originally from the 1713 hoard. Another is in Brukenthal National Museum in Sibiu, Romania. High magnification microscopic analysis performed there, following the research on the coin at The Hunterian, has revealed similar evidence of authenticity.

Curator of Numismatics at The Hunterian, Jesper Ericsson, said: "This has been a really exciting project for The Hunterian and we’re delighted that our findings have inspired collaborative research with museum colleagues in Romania. Not only do we hope that this encourages further debate about Sponsian as a historical figure, but also the investigation of coins relating to him held in other museums across Europe."

The interim manager of the Brukenthal National Museum, Alexandru Constantin Chituță, said: "For the history of Transylvania and Romania in particular, but also for the history of Europe in general, if these results are accepted by the scientific community they will mean the addition of another important historical figure in our history.

“It is a wonderful thing for the Brukenthal National Museum, because the museum in Sibiu, Romania, is the holder of the only known coin belonging to Sponsian from the territory of Romania. I would like to express my gratitude to the colleagues from the Brukenthal Național Museum - History Museum Altemberger House and especially to the leader of the scientific team, Professor Paul N. Pearson from UCL, for their commitment, hard work and their impressive result."

Four gold coins analysed by researchers, including the Sponsian coin and other Roman coins previously dismissed as forgeries, are on display in The Hunterian at the University of Glasgow, while the Sponsian coin in the Brukenthal National Museum is also on public display.

Saturday, November 19, 2022

Researchers discovered Egypt’s oldest tomb oriented to winter solstice


Located in the necropolis of Qubbet el-Hawa, it is precisely oriented to the sunrise of the winter solstice, in such a way that the sun's rays bathed with its light the place that was intended to house the statue of a governor of the city ofElephantine

Peer-Reviewed Publication


Researchers discovered Egypt’s oldest tomb oriented to winter solstice 

IMAGE: LOCATED IN THE NECROPOLIS OF QUBBET EL-HAWA (ASWAN), IT IS PRECISELY ORIENTED TO THE SUNRISE OF THE WINTER SOLSTICE, IN SUCH A WAY THAT THE SUN'S RAYS BATHED WITH ITS LIGHT THE PLACE THAT WAS INTENDED TO HOUSE THE STATUE OF A GOVERNOR OF THE CITY OF ELEPHANTINE, WHO LIVED AT THE END OF THE XII DYNASTY, AROUND 1830 B. C. view more 

CREDIT: UNIVERSITY OF JAEN AND MALAGA

Researchers of the University of Malaga (UMA) and the University of Jaen (UJA) have discovered Egypt’s oldest tomb oriented to the winter solstice. Located in the necropolis of Qubbet el-Hawa (Aswan), it is precisely oriented to the sunrise of the winter solstice, in such a way that the sun's rays bathed with its light the place that was intended to house the statue of a governor of the city of Elephantine, who lived at the end of the XII Dynasty, around 1830 b. C.

This way, the tomb perfectly registered the whole solar cycle, related to the idea of rebirth. While the winter solstice meant the beginning of the sunlight victory over darkness, the summer solstice generally coincided with the beginning of the annual flooding of the Nile, hence both events had an important symbolism linked to the resurrection of the deceased governor.

Perfection in the orientation

In this paper, recently published in the prestigious scientific journal Mediterranean Archaeology and Archaeometry, the researchers explain that, in order to achieve perfection in the orientation, the Egyptian architect simply used a two-cubit pole, around one meter long, a square and some robes, with which he was able to perfectly calculate the orientation of the funerary chapel and the location of the statue of the governor.

Moreover, they explain that the Egyptian architect not only achieved the perfect orientation, but also designed its volume with great precision, as determined in a previous paper published by the UJA in 2020 and signed by, among others, Professor Antonio Mozas –also author of this article–, which revealed that the volume of the tomb was perfectly calculated to avoid being coincident with any previous tomb.

The tomb of this governor, catalogued with No. 33, and possibly built by Governor Heqaib-ankh, was excavated by the UJA between 2008 and 2018. From that time on, it has been architecturally studied by different specialists, among them, the Professor of Architecture at the UMA Lola Joyanes, who has been participating in this project since 2015, working on her own line of research since 2019.

The work this researcher of the UMA has performed in the necropolis involves everything related to architecture and landscape, particularly, their study through drawing and photogrammetry.

A specific software to reproduce the position of the sun

The Andalusian scientists reached these conclusions thanks to the identification of the period where the tomb was built, which allowed them to use a specific software (Dialux Evo) that reproduces the position of the sun with respect to the horizon in ancient times.

“This study demonstrates that Egyptians were capable of calculating the position of the sun and the orientation of its rays to design their monuments. Although the tomb No. 33 of Qubbet el-Hawa is the oldest example ever found, certainly it is not the only one”, say the scientists.

This research has been financed by the Government of Andalusia within its projects “A way to immortality: beyond the preparation for death during Middle Kingdom at Qubbet el-Hawa (Aswan, Egypt)” of the University of Jaen and “Archaeology, Architecture and Landscape: typological evolution and state of conservation of tombs in the necropolis of Qubbet el-Hawa (Aswan, Egypt). Intervention criteria”.

Bibliography:

Mediterranean Archaeology and Archaeometry, Vol. 22, No 2, (2022), pp. 209-235.

DOI: 10.5281/zenodo.6815469

Wednesday, November 2, 2022

Ancient DNA analysis sheds light on the early peopling of South America


Map - Summary of Migrations 

IMAGE: THE FIRST SOUTHERN NORTH AMERICAN GROUPS ENTERED SOUTH AMERICA AND SPREAD THROUGH THE PACIFIC COAST SETTLING THE ANDES (YELLOW ARROW). AT LEAST ONE POPULATION SPLIT OCCURRED SOON AFTER, BRANCHING THE FIRST GROUPS THAT SETTLED THE ATLANTIC COAST (GREEN ARROW) FROM THE GROUPS THAT GAVE RISE TO THE ANCIENT POPULATIONS OF SOUTHERN CONE. NEW MIGRATIONS MAY HAVE THEN EMERGED ALONG THE ATLANTIC COAST, WITH A POSSIBLE ORIGIN AROUND LAGOA SANTA, HEADING NORTH TOWARD NORTHEAST BRAZIL AND PANAMA, AND SOUTH TO URUGUAY. EVENTUALLY, URUGUAY AND PANAMA WERE LINKED BY A SOUTH-TO-NORTH MIGRATION ROUTE CLOSER TO THE ATLANTIC COAST (PURPLE DOUBLE-HEADED ARROW). view more 

CREDIT: FLORIDA ATLANTIC UNIVERSITY

The Americas were the last continent to be inhabited by humans. An increasing body of archaeological and genomic evidence has hinted to a complex settlement process. This is especially true for South America, where unexpected ancestral signals have raised perplexing scenarios for the early migrations into different regions of the continent.

Many unanswered questions still persist, such as whether the first humans migrated south along the Pacific coast or by some other route. While there is archaeological evidence for a north-to-south migration during the initial peopling of the Americas by ancient Indigenous peoples, where these ancient humans went after they arrived has remained elusive.  

Using DNA from two ancient human individuals unearthed in two different archaeological sites in northeast Brazil – Pedra do Tubarão and Alcobaça – and powerful algorithms and genomic analyses, Florida Atlantic University researchers in collaboration with Emory University have unraveled the deep demographic history of South America at the regional level with some unexpected and surprising results.

Not only do researchers provide new genetic evidence supporting existing archaeological data of the north-to-south migration toward South America, they also have discovered migrations in the opposite direction along the Atlantic coast – for the first time. The work provides the most complete genetic evidence to date for complex ancient Central and South American migration routes.

Among the key findings, researchers also have discovered evidence of Neanderthal ancestry within the genomes of ancient individuals from South America. Neanderthals are an extinct population of archaic humans that ranged across Eurasia during the Lower and Middle Paleolithic. 

Results of the study, published in the journal Proceedings of the Royal Society B. (Biological Sciences), suggest that human movements closer to the Atlantic coast eventually linked ancient Uruguay and Panama in a south-to-north migration route – 5,277 kilometers (3,270 miles) apart. This novel migration pattern is estimated to have occurred approximately 1,000 years ago based on the ages of the ancient individuals.

Findings show a distinct relationship among ancient genomes from northeast Brazil, Lagoa Santa (southeast Brazil), Uruguay and Panama. This new model reveals that the settlement of the Atlantic coast occurred only after the peopling of most of the Pacific coast and Andes.

“Our study provides key genomic evidence for ancient migration events at the regional scale along South America’s Atlantic coast,” said Michael DeGiorgio, Ph.D., co-corresponding author who specializes in human, evolutionary, and computational genomics and is an associate professor in the Department of Electrical Engineering and Computer Science within FAU’s College of Engineering and Computer Science. “These regional events likely derived from migratory waves involving the initial Indigenous peoples of South America near the Pacific coast.”

Researchers also found strong Australasian (Australia and Papua New Guinea) genetic signals in an ancient genome from Panama.

“There is an entire Pacific Ocean between Australasia and the Americas, and we still don’t know how these ancestral genomic signals appeared in Central and South America without leaving traces in North America,” said Andre Luiz Campelo dos Santos, Ph.D., first author, an archaeologist and a postdoctoral fellow in FAU’s Department of Electrical Engineering and Computer Science.

To further add to the existing complexity, researchers also detected greater Denisovan than Neanderthal ancestry in ancient Uruguay and Panama individuals. Denisovans are a group of extinct humans first identified from DNA sequences from the tip of finger bone discovered around 2008.

“It’s phenomenal that Denisovan ancestry made it all the way to South America,” says John Lindo, Ph.D., a co-corresponding author of the article who specializes in ancient DNA analysis and is an assistant professor in the Department of Anthropology at Emory University. “The admixture must have occurred a long time before, perhaps 40,000 years ago. The fact that the Denisovan lineage persisted and its genetic signal made it into an ancient individual from Uruguay that is only 1,500 years old suggests that it was a large admixture event between a population of humans and Denisovans.”

Previously at the Federal University of Pernambuco in Recife, Brazil, dos Santos and colleagues uncovered the remains of the two ancient humans from northeast Brazil, which date back to at least 1,000 years before present, and sent them to Lindo for DNA extraction and subsequent genomic sequencing and analyses. Raw data were then sent to FAU for computational analysis of the whole genome sequences from northeast Brazil.

Researchers compared the two newly sequenced ancient whole genomes from northeast Brazil with present-day worldwide genomes and other ancient whole genomes from the Americas. As of the publication date of the article, Lindo says that only a dozen or so ancient whole genomes from South America have been sequenced and published, in contrast to hundreds from Europe. 

Apart from the occurrence of mass burials in the sites that yielded the samples from northeast Brazil, Uruguay, southeast Brazil and Panama, there is no other evidence in the archaeological record that indicate shared cultural features among them. Importantly, the analyzed ancient individuals from southeast Brazil are about 9,000 years older than those from northeast Brazil, Uruguay and Panama, enough time for expected and noticeable cultural divergence. Moreover, northeast Brazil, Uruguay and Panama, though more similar in age, are located thousands of kilometers apart from each other.

“This groundbreaking research involved many different fields from archaeology to biological sciences to genomics and data science,” said Stella Batalama, Ph.D., dean, FAU College of Engineering and Computer Science. “Our scientists at Florida Atlantic University in collaboration with Emory University have helped to shed light on an important piece of the Americas puzzle, which could not have been solved without powerful genomic and computational tools and analysis.”

A Stone Age child buried with bird feathers, plant fibers and fur


An artist’s impression of the child buried in Majoonsuo during their life 

IMAGE: AN ARTIST’S IMPRESSION OF THE CHILD BURIED IN MAJOONSUO DURING THEIR LIFE view more 

CREDIT: TOM BJORKLUND

The exceptional excavation of a Stone Age burial site was carried out in Majoonsuo, situated in the municipality of Outokumpu in Eastern Finland. The excavation produced microscopically small fragments of bird feathers, canine and small mammalian hairs, and plant fibres. The findings gained through soil analysis are unique, as organic matter is poorly preserved in Finland’s acidic soil. The study, led by Archaeologist Tuija Kirkinen, was aimed at investigating how these highly degraded plant- and animal-based materials could be traced through soil analysis.

During the Stone Age in Finland, the deceased were interred mainly in pits in the ground. Little of the organic matter from human-made objects have been preserved in Stone Age graves in Finland, but it is known, on the basis of burial sites in the surrounding regions, that objects made of bones, teeth and horns as well as furs and feathers were placed in the graves.

Teeth and arrowheads found in the red ochre grave

The Trial Excavation Team of the Finnish Heritage Agency examined the site in 2018, as it was considered to be at risk of destruction. The burial place was located under a gravelly sand road in a forest, with the top of the grave partially exposed. The site was originally given away by the intense colour of its red ochre. Red ochre, or iron-rich clay soil, has been used not only in burials but also in rock art around the world.

In the archaeological dig at the burial site, only a few teeth were found of the deceased, on the basis of which they are known to have been a child between 3 and 10 years of age. In addition, two transverse arrowheads made of quartz and two other possible quartz objects were found in the grave. Based on the shape of the arrowheads and shore-level dating, the burial can be estimated to have taken place in the Mesolithic period of the Stone Age, roughly 6,000 years before the Common Era.

What made the excavation exceptional was the near-complete preservation of the soil originating in the grave. A total of 65 soil sample bags weighing between 0.6 and 3.4 kilograms were collected, also comparison samples were taken from outside the grave. The soil was analyzed in the archaeology laboratory of the University of Helsinki. Organic matter was separated from the samples using water. This way, the exposed fibres and hairs were identified with the help of transmitted-light and electron microscopy.

Oldest feather fragments found in Finland

From the soil samples, a total of 24 microscopic (0.2–1.4 mm) fragments of bird feathers were identified, most of which originated in down. Seven feather fragments were identified as coming from the down of a waterfowl (Anseriformes). These are the oldest feather fragments ever found in Finland. Although the origin of the down is impossible to state with certainty, it may come from clothing made of waterfowl skins, such as a parka or an anorak. It is also possible that the child was laid on a down bed.

In addition to the waterfowl down, one falcon (Falconidae) feather fragment was identified. It may have originally been part of the fletching of the arrows attached to the arrowheads, or, for example, from feathers used to decorate the garment.

Dog or wolf hairs?

Besides the feathers, 24 fragments of mammalian hair were identified, ranging from 0.5 to 9.5 mm in length. Most of the hairs were badly degraded, making identification no longer possible. The finest discoveries were the three hairs of a canine, possibly a predator, found at the bottom of the grave. The hairs may also originate, for example, in footwear made of wolf or dog skin. It is also possible a dog was laid at the child’s feet.

“Dogs buried with the deceased have been found in, for example, Skateholm, a famous burial site in southern Sweden dating back some 7,000 years,” says Professor Kristiina Mannermaa, University of Helsinki.

“The discovery in Majoonsuo is sensational, even though there is nothing but hairs left of the animal or animals – not even teeth. We don’t even know whether it’s a dog or a wolf,” she says, adding: “The method used, demonstrates that traces of fur and feathers can be found even in graves several thousands of years old, including in Finland.”

“This all gives us a very valuable insight about burial habits in the Stone Age, indicating how people had prepared the child for the journey after death”, says Kirkinen.

The soil is full of information

Also found were three fragments of plant fibres, which are preserved particularly poorly in the acidic Finnish soil. The fibres were what are known as bast fibres, meaning that they come from, for example, willows or nettles. At the time, the object they were part of may have been a net used for fishing, a cord used to attach clothes, or a bundle of strings. For the time being, only one other bast fibre discovery dating back to the Mesolithic Stone Age is known in Finland: the famed Antrea Net on display in the National Museum of Finland, laced with willow bast fibres.

A fibre separation technique was developed in the study, and is already being applied in subsequent studies. The project has demonstrated the great information value of soil extracted from archaeological sites.

The study is part of the ERC-funded project entitled Animals Make Identities (https://www.helsinki.fi/en/researchgroups/animals-make-identities) headed by Kristiina Mannermaa.

The study was published in the PlosONE series. In addition to Kirkinen and Mannermaa, contributing to the study were Olalla López-Costas and Antonio Martínez Cortizas from the EcoPast research group at the University of Santiago de Compostela, Sanna P. SihvoHanna Ruhanen and Reijo Käkelä from the Helsinki University Lipidomics Unit (HiLIPID), Marja Ahola and Johanna Roiha from the discipline of archaeology at the University of Helsinki, Jan-Erik NymanEsa Mikkola and Janne Rantanen from the Archaeological Field Services unit of the Finnish Heritage Agency and Esa Hertell from the museums of the City of Lappeenranta.

 

 

 

 

Tuesday, November 1, 2022

Ancient genomes reveal hidden history of human adaptation


The use of ancient DNA, including samples of human remains around 45,000 years old, has shed light on a previously unknown aspect of human evolution.

Dr Yassine Souilmi, Group Leader at the University of Adelaide’s Australian Centre for Ancient DNA, co-led the new study published in Nature Ecology and Evolution.

“It was widely believed the genetics of our human ancestors didn’t change due to environmental pressures as much as other animals, due to our enhanced communication skills and ability to make and use tools,” Dr Souilmi said.

“However, by comparing modern genomes with ancient DNA, we discovered more than 50 cases of an initially rare beneficial genetic variant becoming prevalent across all members of ancient human groups.

“In contrast to many other species, evidence for this type of adaptive genetic change has been inconsistent in humans. This discovery consequently challenges the prevailing view of human adaptation, and gives us a new and exciting insight into how humans have adapted to the novel environmental pressures they encountered as we spread across the planet.”

Co-lead author Dr Ray Tobler - an Adjunct Fellow at the University of Adelaide and a DECRA fellow at the Australian National University – said examining ancient DNA has been critical in unlocking the secrets of human evolution.

“We believed historical mixing events between human groups might have hidden signs of genetic changes in modern human genomes,” Dr Tobler said.

“We examined DNA from more than 1,000 ancient genomes, the oldest which was around 45,000 years old, to see if certain types of genetic adaptation had been more common in our history than studies of modern genomes had suggested.”

Professor Christian Huber, a senior author of the research paper, is an Adjunct Fellow at the University of Adelaide and an Assistant Professor at Penn State University.

“The use of ancient genomes was crucial because they preceded major historical mixing events that have radically reshaped modern European genetic ancestry,” Professor Huber said.

“This allowed the recovery of historical signs of adaptation that are invisible to standard analysis of modern genomes.”

Established in 2005, the Australian Centre for Ancient DNA is a world leader in the research and development of advanced ancient DNA approaches for evolutionary, environmental and conservation applications.

Researchers based at the Mayo Clinic, the Garvan Institute of Medical Research, the Max Planck Institute for the Science of Human History in Germany, the University of New South Wales, and Massey University in New Zealand also contributed to the research paper.